bluepyopt.ephys.locations¶
Location classes
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exception
bluepyopt.ephys.locations.
EPhysLocInstantiateException
(message)[source]¶ All exception generated by location instantiation
Constructor
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class
bluepyopt.ephys.locations.
NrnPointProcessLocation
(name, pprocess_mech, comment='')[source]¶ Point process location
Constructor
- Parameters
name (str) – name of the object
pprocess_mech (str) – point process mechanism
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class
bluepyopt.ephys.locations.
NrnSecSomaDistanceCompLocation
(name, soma_distance=None, sec_index=None, sec_name=None, comment='')[source]¶ Compartment on a section defined both by a section index and distance from the soma
Constructor
- Parameters
name (str) – name of this object
soma_distance (float) – distance from soma to this compartment
sec_index (int) – index of the section to consider
sec_name (str) – name of Neuron sections (ex: ‘apic’)
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class
bluepyopt.ephys.locations.
NrnSeclistCompLocation
(name, seclist_name=None, sec_index=None, comp_x=None, comment='')[source]¶ Compartment in a sectionlist
Constructor
- Parameters
name (str) – name of the object
seclist_name (str) – name of Neuron section list (ex: ‘somatic’)
sec_index (int) – index of the section in the section list
comp_x (float) – segx (0..1) of segment inside section
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class
bluepyopt.ephys.locations.
NrnSeclistLocation
(name, seclist_name=None, comment='')[source]¶ Section in a sectionlist
Constructor
- Parameters
name (str) – name of the object
seclist_name (str) – name of NEURON section list (ex: ‘somatic’)
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class
bluepyopt.ephys.locations.
NrnSeclistSecLocation
(name, seclist_name=None, sec_index=None, comment='')[source]¶ Section in a sectionlist
Constructor
- Parameters
name (str) – name of this object
seclist_name (str) – name of Neuron section list (ex: ‘somatic’)
sec_index (int) – index of the section
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class
bluepyopt.ephys.locations.
NrnSectionCompLocation
(name, sec_name=None, comp_x=None, comment='')[source]¶ Compartment in a section
Constructor
- Parameters
name (str) – name of the object
sec_name (str) – name of Neuron section (ex: ‘soma[0]’)
comp_x (float) – segx (0..1) of segment inside section
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class
bluepyopt.ephys.locations.
NrnSomaDistanceCompLocation
(name, soma_distance=None, seclist_name=None, comment='')[source]¶ Compartment at distance from soma
Constructor
- Parameters
name (str) – name of this object
soma_distance (float) – distance from soma to this compartment
seclist_name (str) – name of Neuron section list (ex: ‘apical’)